Duration: 4 h

This session aims to share some practical skills in 3D reconstruction of neuronal skeletton and its following applications for defining structural cell identity. Practical session will rely on Imaris for 3D segmentation and MATLAB for data analysis and classification.

Software Requirements:

• BitPlane Imaris Demo
• Neuron Studio http://research.mssm.edu/cnic/tools-ns.html
• Fiji http://fiji.sc/Fiji
• MATLAB 2013a +
• Microsoft Excel/Open Office
• Notepad++

Materials of the course

Tutor

Mr. Nikita Lukianets

Country: France

Place of employment: University of Nice-Sophia Antipolis, Labex SIGNALIFE